- Predicted Gene MLOC_61901
MLOC_61901 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_61901_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_61901_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.0304242 | 0.0266017 | 0 | 0.0406996 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
INF1 | Young developing inflorescences (5mm) | 17.549 | 16.7422 | 22.2234 | 17.7766 |
INF2 | Developing inflorescences (1-1.5 cm) | 51.2707 | 39.6485 | 42.2732 | 53.8695 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.15937 | 0.115461 | 0.167317 | 0.196678 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.422274 | 2.97468 | 2.29036 | 10.8701 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.543512 | 0.284589 | 0.332162 | 0.420585 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.244292 | 0.237931 | 0.0715472 | 0.535973 |
CDS Structure of MLOC_61901
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_61901.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g01820.2 |
+2 |
2e-105 |
320 |
217/280 (78%) |
13107.m00099 protein OsMADS15 - MADS-box family gene with MIKCc type-box, expressed |
TAIR PP10 |
AT1G69120.1 |
+2 |
1e-66 |
219 |
121/175 (69%) |
| Symbols: AP1, AGL7 | K-box region and MADS-box transcription factor family protein | chr1:25982576-25986102 REVERSE LENGTH=256 |