MLOC_61898 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.654612.337952.291462.66827
LEAShoots from the seedlings (10 cm shoot stage)1.345950.6187450.5484570.731965
INF1Young developing inflorescences (5mm)23.195535.479434.481930.6997
INF2Developing inflorescences (1-1.5 cm)28.669330.152528.313835.577
ROORoots from the seedlings (10 cm shoot stage)3.627963.314474.00324.43409
NODDeveloping tillers at six leaf stage, 3rd internode0.02349310.1012780.1560510.347652
CAR5Developing grain, bracts removed (5 DPA)1.176721.18070.6386771.11383
CAR15Developing grain, bracts removed (15 DPA)2.906792.989162.277937.41579



CDS Structure of MLOC_61898






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61898.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_61898.2NoneAvailableAvailablecontig_45972 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g45540.1 +1 3e-121 357 186/257 (72%) 13106.m04802 protein zinc-binding protein, putative, expressed
TAIR PP10 AT1G31040.1 +1 6e-77 242 135/237 (57%) PLATZ transcription factor family protein | chr1:11069793-11072182 REVERSE LENGTH=243