MLOC_61836 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.851843.028353.609233.26502
LEAShoots from the seedlings (10 cm shoot stage)2.440811.903390.8307231.50286
INF1Young developing inflorescences (5mm)9.6096711.50669.444738.89996
INF2Developing inflorescences (1-1.5 cm)4.440474.540644.320655.05017
ROORoots from the seedlings (10 cm shoot stage)3.545932.344273.406863.33581
NODDeveloping tillers at six leaf stage, 3rd internode1.778132.584923.34299.42144
CAR5Developing grain, bracts removed (5 DPA)15.231514.342515.889615.203
CAR15Developing grain, bracts removed (15 DPA)11.343615.53989.6053530.3588



CDS Structure of MLOC_61836






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61836.6
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358837NoneNoneNoneNone
MLOC_61836.6CUST_4531_PI427708080AvailableAvailablecontig_459137 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g38600.1 +2 0.0 701 342/399 (86%) 13108.m04096 protein copine, putative, expressed
TAIR PP10 AT5G14420.2 +2 4e-173 500 248/388 (64%) | Symbols: RGLG2 | RING domain ligase2 | chr5:4648355-4650563 REVERSE LENGTH=468