- Predicted Gene MLOC_61836
MLOC_61836 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.85184 | 3.02835 | 3.60923 | 3.26502 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 2.44081 | 1.90339 | 0.830723 | 1.50286 |
| INF1 | Young developing inflorescences (5mm) | 9.60967 | 11.5066 | 9.44473 | 8.89996 |
| INF2 | Developing inflorescences (1-1.5 cm) | 4.44047 | 4.54064 | 4.32065 | 5.05017 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.54593 | 2.34427 | 3.40686 | 3.33581 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.77813 | 2.58492 | 3.3429 | 9.42144 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 15.2315 | 14.3425 | 15.8896 | 15.203 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 11.3436 | 15.5398 | 9.60535 | 30.3588 |
CDS Structure of MLOC_61836
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_61836.6
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g38600.1 |
+2 |
0.0 |
701 |
342/399 (86%) |
13108.m04096 protein copine, putative, expressed |
| TAIR PP10 |
AT5G14420.2 |
+2 |
4e-173 |
500 |
248/388 (64%) |
| Symbols: RGLG2 | RING domain ligase2 | chr5:4648355-4650563 REVERSE LENGTH=468 |