MLOC_61818 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains57.80557.293756.704460.3201
LEAShoots from the seedlings (10 cm shoot stage)67.033465.917575.838961.9108
INF1Young developing inflorescences (5mm)64.320767.037370.331357.1756
INF2Developing inflorescences (1-1.5 cm)51.831361.687854.408563.2181
ROORoots from the seedlings (10 cm shoot stage)22.338935.711830.248242.4817
NODDeveloping tillers at six leaf stage, 3rd internode12.234913.47222.431551.4502
CAR5Developing grain, bracts removed (5 DPA)36.409138.924739.171638.0889
CAR15Developing grain, bracts removed (15 DPA)4.268683.471645.956310.1157



CDS Structure of MLOC_61818






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61818.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_61818.1CUST_14336_PI427708080AvailableAvailablecontig_45899 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g42100.1 -1 0.0 917 470/531 (89%) 13110.m03950 protein pyruvate kinase, putative, expressed
TAIR PP10 AT1G32440.1 -1 0.0 717 372/487 (76%) | Symbols: PKp3 | plastidial pyruvate kinase 3 | chr1:11712205-11714963 FORWARD LENGTH=571