MLOC_61817 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.42113.676863.445054.06657
LEAShoots from the seedlings (10 cm shoot stage)6.05254.385495.30714.59329
INF1Young developing inflorescences (5mm)0.78081.181921.050831.04451
INF2Developing inflorescences (1-1.5 cm)0.7624530.629330.8750570.93763
ROORoots from the seedlings (10 cm shoot stage)28.588314.346413.504919.9801
NODDeveloping tillers at six leaf stage, 3rd internode4.04266.430465.8368218.7627
CAR5Developing grain, bracts removed (5 DPA)1.800632.313771.933452.40082
CAR15Developing grain, bracts removed (15 DPA)0.5526550.8189190.6110731.9146



CDS Structure of MLOC_61817






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61817.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370231NoneNoneNoneNone
MLOC_61817.2CUST_4529_PI427708080AvailableAvailablecontig_45899 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g23880.1 +3 0.0 1310 663/853 (78%) 13105.m02435 protein lipoxygenase, putative, expressed
TAIR PP10 AT3G22400.1 +3 0.0 758 409/828 (49%) | Symbols: LOX5 | PLAT/LH2 domain-containing lipoxygenase family protein | chr3:7927011-7931167 FORWARD LENGTH=886