- Predicted Gene MLOC_61817
MLOC_61817 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.4211 | 3.67686 | 3.44505 | 4.06657 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 6.0525 | 4.38549 | 5.3071 | 4.59329 |
| INF1 | Young developing inflorescences (5mm) | 0.7808 | 1.18192 | 1.05083 | 1.04451 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.762453 | 0.62933 | 0.875057 | 0.93763 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 28.5883 | 14.3464 | 13.5049 | 19.9801 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.0426 | 6.43046 | 5.83682 | 18.7627 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.80063 | 2.31377 | 1.93345 | 2.40082 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.552655 | 0.818919 | 0.611073 | 1.9146 |
CDS Structure of MLOC_61817
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_61817.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g23880.1 |
+3 |
0.0 |
1310 |
663/853 (78%) |
13105.m02435 protein lipoxygenase, putative, expressed |
| TAIR PP10 |
AT3G22400.1 |
+3 |
0.0 |
758 |
409/828 (49%) |
| Symbols: LOX5 | PLAT/LH2 domain-containing lipoxygenase family protein | chr3:7927011-7931167 FORWARD LENGTH=886 |