MLOC_61790 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains178.693172.77178.359183.769
LEAShoots from the seedlings (10 cm shoot stage)54.196763.992250.878249.4579
INF1Young developing inflorescences (5mm)59.23665.209164.443756.5613
INF2Developing inflorescences (1-1.5 cm)61.666755.065457.375967.2193
ROORoots from the seedlings (10 cm shoot stage)83.658790.1825107.964111.382
NODDeveloping tillers at six leaf stage, 3rd internode49.334943.804642.3106153.728
CAR5Developing grain, bracts removed (5 DPA)78.947683.350684.113385.2755
CAR15Developing grain, bracts removed (15 DPA)21.237219.514718.684649.7369



CDS Structure of MLOC_61790






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61790.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361323NoneNoneNoneNone
MLOC_61790.1CUST_4521_PI427708080AvailableAvailablecontig_45866 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g33080.1 +1 0.0 540 261/285 (92%) 13102.m03581 protein N-carbamoylputrescine amidase, putative, expressed
TAIR PP10 AT2G27450.1 +1 8e-172 491 234/282 (83%) | Symbols: NLP1, ATNLP1, CPA | nitrilase-like protein 1 | chr2:11737666-11739577 REVERSE LENGTH=299