MLOC_61789 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.820461.287282.096781.85925
LEAShoots from the seedlings (10 cm shoot stage)00.4127351.27720.72171
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)2.015981.437860.4824921.62006
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_61789






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61789.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364102NoneNoneNoneNone
MLOC_61789.1CUST_18236_PI427708080AvailableAvailablecontig_45865 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g72430.1 +1 1e-93 283 136/197 (69%) 13101.m07893 protein NADPH quinone oxidoreductase, putative, expressed
TAIR PP10 AT3G27890.1 +1 8e-81 249 123/197 (62%) | Symbols: NQR | NADPH:quinone oxidoreductase | chr3:10350807-10351938 REVERSE LENGTH=196