MLOC_61777 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains48.225137.305113.18179.0527
LEAShoots from the seedlings (10 cm shoot stage)117.04537.56130.903849.0787
INF1Young developing inflorescences (5mm)73.878961.910458.966443.382
INF2Developing inflorescences (1-1.5 cm)41.953238.981841.68335.4675
ROORoots from the seedlings (10 cm shoot stage)39.544554.128155.96247.8842
NODDeveloping tillers at six leaf stage, 3rd internode87.039832.112812.317183.2281
CAR5Developing grain, bracts removed (5 DPA)40.07934.972140.594428.6664
CAR15Developing grain, bracts removed (15 DPA)5.278983.69245.386878.4696



CDS Structure of MLOC_61777






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61777.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_61777.2CUST_12893_PI427708083AvailableAvailablecontig_45858 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g19450.1 -1 6e-67 234 131/132 (99%) 13101.m02115 protein ATP-citrate synthase subunit 1, putative, expressed
TAIR PP10 AT5G49460.1 -1 4e-62 220 121/132 (92%) | Symbols: ACLB-2 | ATP citrate lyase subunit B 2 | chr5:20055048-20058195 FORWARD LENGTH=608