- Predicted Gene MLOC_61771
MLOC_61771 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.65058 | 19.4927 | 18.3755 | 15.7477 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 22.4724 | 8.94907 | 7.4541 | 11.7563 |
| INF1 | Young developing inflorescences (5mm) | 33.6263 | 32.3799 | 30.4252 | 25.9655 |
| INF2 | Developing inflorescences (1-1.5 cm) | 37.1067 | 36.7232 | 32.1532 | 39.681 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.32338 | 8.23711 | 5.47354 | 9.36879 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 25.4025 | 25.932 | 14.0715 | 91.7491 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 22.3969 | 21.1917 | 25.1283 | 22.5869 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 17.9705 | 14.9364 | 16.5777 | 36.1947 |
CDS Structure of MLOC_61771
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_61771.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g21940.1 |
-3 |
0.0 |
2372 |
1330/1845 (72%) |
13110.m01826 protein expressed protein |
| TAIR PP10 |
AT1G22060.1 |
-3 |
0.0 |
677 |
501/1652 (30%) |
LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: FBD, F-box and Leucine Rich Repeat domains containing protein (TAIR:AT1G22000.1); Has 84739 Blast hits to 38714 proteins in 2257 species: Archae - 1436; Bacteria - 11314; Metazoa - 40747; Fungi - 7706; Plants - 4675; Viruses - 308; Other Eukaryotes - 18553 (source: NCBI BLink). | chr1:7773373-7780586 REVERSE LENGTH=1999 |