MLOC_61751 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.14202800.339141
LEAShoots from the seedlings (10 cm shoot stage)00.5281080.1287190.370987
INF1Young developing inflorescences (5mm)0.2375510.3338140.07354390.223224
INF2Developing inflorescences (1-1.5 cm)0.4397970.41451500.606969
ROORoots from the seedlings (10 cm shoot stage)00.1704461.216780.598241
NODDeveloping tillers at six leaf stage, 3rd internode0.49305500.06441320.0659937
CAR5Developing grain, bracts removed (5 DPA)3131.273606.13579.133817.73
CAR15Developing grain, bracts removed (15 DPA)0.5057960.1269510.5784651.0122



CDS Structure of MLOC_61751






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61751.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375129NoneNoneNoneNone
MLOC_61751.1CUST_4514_PI427708080AvailableAvailablecontig_45837 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g29420.1 +3 9e-14 67 40/114 (35%) 13111.m02838 protein LTPL30 - Protease inhibitor/seed storage/LTP family protein precursor, putative
TAIR PP10 AT4G30880.1 +3 3e-12 61 33/107 (31%) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr4:15035229-15035750 FORWARD LENGTH=109