MLOC_61727 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.645133.140043.797223.78989
LEAShoots from the seedlings (10 cm shoot stage)25.1975.529813.6631410.4858
INF1Young developing inflorescences (5mm)0.8647671.073590.828020.905045
INF2Developing inflorescences (1-1.5 cm)12.000311.276515.075915.444
ROORoots from the seedlings (10 cm shoot stage)37.331716.932815.338228.0272
NODDeveloping tillers at six leaf stage, 3rd internode0.1074690.359440.231411.36828
CAR5Developing grain, bracts removed (5 DPA)16.364713.803210.440115.1938
CAR15Developing grain, bracts removed (15 DPA)28.403529.690622.626571.5712



CDS Structure of MLOC_61727






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61727.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374665NoneNoneNoneNone
MLOC_61727.1CUST_4513_PI427708080AvailableAvailablecontig_45812 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g02260.1 +3 0.0 1121 607/677 (90%) 13103.m00178 protein DnaK family protein, putative, expressed
TAIR PP10 AT5G09590.1 +3 0.0 1009 540/680 (79%) | Symbols: MTHSC70-2, HSC70-5 | mitochondrial HSO70 2 | chr5:2975721-2978508 FORWARD LENGTH=682