MLOC_61726 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains90.454556.644160.223961.8752
LEAShoots from the seedlings (10 cm shoot stage)24.14838.5949513.582611.653
INF1Young developing inflorescences (5mm)78.347188.749187.305168.6222
INF2Developing inflorescences (1-1.5 cm)69.106772.19673.325675.1589
ROORoots from the seedlings (10 cm shoot stage)86.194851.699853.669155.8134
NODDeveloping tillers at six leaf stage, 3rd internode7.911288.1693415.74824.336
CAR5Developing grain, bracts removed (5 DPA)69.899875.497675.161667.88
CAR15Developing grain, bracts removed (15 DPA)11.48879.163919.8799723.9095



CDS Structure of MLOC_61726






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61726.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370422NoneNoneNoneNone
MLOC_61726.2CUST_4512_PI427708080AvailableAvailablecontig_45808 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g37000.1 -3 8e-128 384 225/267 (84%) 13102.m04050 protein mitochondrial prohibitin complex protein 1, putative, expressed
TAIR PP10 AT5G40770.1 -3 2e-118 358 208/268 (78%) | Symbols: ATPHB3, PHB3 | prohibitin 3 | chr5:16315589-16316621 REVERSE LENGTH=277