MLOC_61703 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.04510.4322050.1472520.502162
LEAShoots from the seedlings (10 cm shoot stage)28.687769.20476.677546.262
INF1Young developing inflorescences (5mm)1.734651.795591.710031.30996
INF2Developing inflorescences (1-1.5 cm)0.7123340.4460411.036280.7029
ROORoots from the seedlings (10 cm shoot stage)00.089808300.0662364
NODDeveloping tillers at six leaf stage, 3rd internode2.358923.28217.8867311.0414
CAR5Developing grain, bracts removed (5 DPA)2.62513.860672.733162.4517
CAR15Developing grain, bracts removed (15 DPA)0.1081270.4470240.4287030.535168



CDS Structure of MLOC_61703






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61703.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365893NoneNoneNoneNone
MLOC_61703.2CUST_4504_PI427708080AvailableAvailablecontig_45775 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g66000.1 -2 8e-112 325 158/200 (79%) 13101.m07139 protein NADH dehydrogenase I subunit N, putative, expressed
TAIR PP10 AT5G58260.1 -2 1e-85 258 120/182 (66%) oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor | chr5:23561075-23561929 REVERSE LENGTH=209