- Predicted Gene MLOC_61672
MLOC_61672 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_61672_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_61672_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 13.6537 | 10.5035 | 11.8781 | 12.4921 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 9.73267 | 7.293 | 9.76605 | 7.89512 |
INF1 | Young developing inflorescences (5mm) | 15.41 | 17.4876 | 18.2922 | 14.8698 |
INF2 | Developing inflorescences (1-1.5 cm) | 15.6002 | 15.9882 | 18.1833 | 18.7709 |
ROO | Roots from the seedlings (10 cm shoot stage) | 11.6827 | 10.5554 | 12.0698 | 14.1265 |
NOD | Developing tillers at six leaf stage, 3rd internode | 7.19598 | 7.27596 | 7.59077 | 25.1416 |
CAR5 | Developing grain, bracts removed (5 DPA) | 11.0356 | 9.68575 | 13.2821 | 11.6738 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.77465 | 5.61532 | 7.22974 | 14.4106 |
CDS Structure of MLOC_61672
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_61672.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g19480.1 |
+3 |
1e-108 |
322 |
159/202 (79%) |
13106.m02079 protein expressed protein |
TAIR PP10 |
AT3G04950.1 |
+3 |
3e-63 |
206 |
103/191 (54%) |
CONTAINS InterPro DOMAIN/s: SEC-C motif (InterPro:IPR004027); Has 583 Blast hits to 583 proteins in 248 species: Archae - 0; Bacteria - 488; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). | chr3:1371786-1373300 FORWARD LENGTH=231 |