MLOC_61671 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.3719212.930213.27311.4048
LEAShoots from the seedlings (10 cm shoot stage)17.457615.276614.832713.3602
INF1Young developing inflorescences (5mm)34.830738.854445.109230.9387
INF2Developing inflorescences (1-1.5 cm)79.428364.336468.945971.9338
ROORoots from the seedlings (10 cm shoot stage)6.4072513.825912.345214.4822
NODDeveloping tillers at six leaf stage, 3rd internode10.573717.879521.822957.9853
CAR5Developing grain, bracts removed (5 DPA)21.427520.488421.280718.9566
CAR15Developing grain, bracts removed (15 DPA)18.881317.824816.771838.1674



CDS Structure of MLOC_61671






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61671.5
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372914NoneNoneNoneNone
MLOC_61671.5CUST_4495_PI427708080AvailableAvailablecontig_45740 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g19470.2 +3 0.0 714 464/721 (64%) 13106.m02075 protein WW domain containing protein, expressed
TAIR PP10 AT3G13225.2 +3 1e-32 137 129/429 (30%) WW domain-containing protein | chr3:4258928-4262853 REVERSE LENGTH=892