- Predicted Gene MLOC_61671
MLOC_61671 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 8.37192 | 12.9302 | 13.273 | 11.4048 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 17.4576 | 15.2766 | 14.8327 | 13.3602 |
INF1 | Young developing inflorescences (5mm) | 34.8307 | 38.8544 | 45.1092 | 30.9387 |
INF2 | Developing inflorescences (1-1.5 cm) | 79.4283 | 64.3364 | 68.9459 | 71.9338 |
ROO | Roots from the seedlings (10 cm shoot stage) | 6.40725 | 13.8259 | 12.3452 | 14.4822 |
NOD | Developing tillers at six leaf stage, 3rd internode | 10.5737 | 17.8795 | 21.8229 | 57.9853 |
CAR5 | Developing grain, bracts removed (5 DPA) | 21.4275 | 20.4884 | 21.2807 | 18.9566 |
CAR15 | Developing grain, bracts removed (15 DPA) | 18.8813 | 17.8248 | 16.7718 | 38.1674 |
CDS Structure of MLOC_61671
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_61671.5
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g19470.2 |
+3 |
0.0 |
714 |
464/721 (64%) |
13106.m02075 protein WW domain containing protein, expressed |
TAIR PP10 |
AT3G13225.2 |
+3 |
1e-32 |
137 |
129/429 (30%) |
WW domain-containing protein | chr3:4258928-4262853 REVERSE LENGTH=892 |