MLOC_61666 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.4566311.531310.74479.44725
LEAShoots from the seedlings (10 cm shoot stage)12.582813.748411.99829.9434
INF1Young developing inflorescences (5mm)22.489124.332124.750617.5836
INF2Developing inflorescences (1-1.5 cm)25.597926.403324.653125.2869
ROORoots from the seedlings (10 cm shoot stage)5.8930810.68587.5538510.3342
NODDeveloping tillers at six leaf stage, 3rd internode7.846889.7234910.553329.9401
CAR5Developing grain, bracts removed (5 DPA)13.224413.772915.030812.0261
CAR15Developing grain, bracts removed (15 DPA)6.40036.261915.6303512.7051



CDS Structure of MLOC_61666






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61666.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374389NoneNoneNoneNone
MLOC_61666.1CUST_4493_PI427708080AvailableAvailablecontig_45728 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g09900.1 +3 0.0 1223 589/718 (82%) 13102.m01092 protein transposon protein, putative, unclassified, expressed
TAIR PP10 AT1G64260.1 +3 2e-36 147 128/532 (24%) MuDR family transposase | chr1:23847756-23849915 FORWARD LENGTH=719