MLOC_61580 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.354513.927812.234615.6147
LEAShoots from the seedlings (10 cm shoot stage)18.123722.270918.006518.9055
INF1Young developing inflorescences (5mm)46.805355.044752.955150.7859
INF2Developing inflorescences (1-1.5 cm)32.034142.540143.078349.7584
ROORoots from the seedlings (10 cm shoot stage)7.042629.951813.778714.6384
NODDeveloping tillers at six leaf stage, 3rd internode17.28411.409612.217644.4829
CAR5Developing grain, bracts removed (5 DPA)12.503711.796713.54514.4607
CAR15Developing grain, bracts removed (15 DPA)1.769430.9101352.38784.05831



CDS Structure of MLOC_61580






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61580.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_61580.2CUST_8422_PI427708083AvailableAvailablecontig_45647 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g12900.1 +1 2e-132 380 183/212 (86%) 13101.m01409 protein ras-related protein, putative, expressed
TAIR PP10 AT4G28950.1 +1 8e-110 321 155/205 (76%) | Symbols: ARAC7, ATROP9, ATRAC7, RAC7, ROP9 | RHO-related protein from plants 9 | chr4:14278289-14279705 FORWARD LENGTH=209