MLOC_61579 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.482951.425222.291562.1554
LEAShoots from the seedlings (10 cm shoot stage)1.377821.720922.356411.87213
INF1Young developing inflorescences (5mm)0.1401720.1365770.1237680.140322
INF2Developing inflorescences (1-1.5 cm)0.0489980.07013720.06167070.0894487
ROORoots from the seedlings (10 cm shoot stage)00.132720.3251370.385412
NODDeveloping tillers at six leaf stage, 3rd internode0.3790410.368660.2010341.13654
CAR5Developing grain, bracts removed (5 DPA)0.02748670.1036470.0837250.110378
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_61579






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61579.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_61579.1CUST_14300_PI427708080AvailableAvailablecontig_45643 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g05460.2 -2 5e-118 347 164/226 (73%) 13105.m10340 protein EF hand family protein, putative, expressed
TAIR PP10 AT3G24110.1 -2 9e-54 181 88/210 (42%) Calcium-binding EF-hand family protein | chr3:8704429-8705413 REVERSE LENGTH=229