- Predicted Gene MLOC_61579
MLOC_61579 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_61579_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_61579_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 1.48295 | 1.42522 | 2.29156 | 2.1554 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.37782 | 1.72092 | 2.35641 | 1.87213 |
INF1 | Young developing inflorescences (5mm) | 0.140172 | 0.136577 | 0.123768 | 0.140322 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.048998 | 0.0701372 | 0.0616707 | 0.0894487 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.13272 | 0.325137 | 0.385412 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.379041 | 0.36866 | 0.201034 | 1.13654 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.0274867 | 0.103647 | 0.083725 | 0.110378 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0 | 0 |
CDS Structure of MLOC_61579
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_61579.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g05460.2 |
-2 |
5e-118 |
347 |
164/226 (73%) |
13105.m10340 protein EF hand family protein, putative, expressed |
TAIR PP10 |
AT3G24110.1 |
-2 |
9e-54 |
181 |
88/210 (42%) |
Calcium-binding EF-hand family protein | chr3:8704429-8705413 REVERSE LENGTH=229 |