MLOC_61578 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.9352931.631251.55041.22573
LEAShoots from the seedlings (10 cm shoot stage)0.62373800.05598420.15334
INF1Young developing inflorescences (5mm)8.346929.37068.330276.97145
INF2Developing inflorescences (1-1.5 cm)11.243512.20619.1570911.9606
ROORoots from the seedlings (10 cm shoot stage)0.8006511.205831.02241.07272
NODDeveloping tillers at six leaf stage, 3rd internode0.5962840.8746860.8572192.24707
CAR5Developing grain, bracts removed (5 DPA)2.984043.333983.15142.9426
CAR15Developing grain, bracts removed (15 DPA)0.8249760.5128460.7670571.50217



CDS Structure of MLOC_61578






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61578.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_61578.2CUST_14299_PI427708080AvailableAvailablecontig_45643 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g05440.1 -2 0.0 1039 669/1224 (55%) 13105.m00567 protein expressed protein
TAIR PP10 AT3G21480.1 -2 3e-96 335 310/1034 (30%) BRCT domain-containing DNA repair protein | chr3:7567730-7571990 FORWARD LENGTH=1041