MLOC_61576 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.190045.559554.61964.4679
LEAShoots from the seedlings (10 cm shoot stage)5.199523.392553.046723.28287
INF1Young developing inflorescences (5mm)13.178911.616410.116210.2363
INF2Developing inflorescences (1-1.5 cm)13.777914.054712.355515.2554
ROORoots from the seedlings (10 cm shoot stage)1.381443.827483.181914.33979
NODDeveloping tillers at six leaf stage, 3rd internode0.6136260.9221361.546953.88905
CAR5Developing grain, bracts removed (5 DPA)8.148128.246988.071727.96805
CAR15Developing grain, bracts removed (15 DPA)3.047162.870162.399296.32049



CDS Structure of MLOC_61576






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61576.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_61576.1CUST_14298_PI427708080AvailableAvailablecontig_45643 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g05440.1 -3 0.0 637 397/740 (54%) 13105.m00567 protein expressed protein
TAIR PP10 AT5G17930.1 +3 0.0 585 328/575 (57%) MIF4G domain-containing protein / MA3 domain-containing protein | chr5:5940131-5943952 REVERSE LENGTH=784