MLOC_61570 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.455735.234785.369125.62532
LEAShoots from the seedlings (10 cm shoot stage)4.846432.206284.67113.35093
INF1Young developing inflorescences (5mm)13.480414.811214.984513.0673
INF2Developing inflorescences (1-1.5 cm)15.965918.339614.741918.9642
ROORoots from the seedlings (10 cm shoot stage)6.296397.520765.930818.79591
NODDeveloping tillers at six leaf stage, 3rd internode0.6163341.11593.953775.4967
CAR5Developing grain, bracts removed (5 DPA)9.224112.17711.795311.5805
CAR15Developing grain, bracts removed (15 DPA)4.740284.348893.9306710.9414



CDS Structure of MLOC_61570






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61570.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356490NoneNoneNoneNone
MLOC_61570.1CUST_4486_PI427708080AvailableAvailablecontig_45638 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g10470.2 -1 3e-119 362 252/391 (64%) 13108.m01115 protein histone-lysine N-methyltransferase ASHR2, putative, expressed
TAIR PP10 AT2G19640.2 -1 2e-59 205 106/219 (48%) | Symbols: ASHR2 | ASH1-related protein 2 | chr2:8491401-8492597 FORWARD LENGTH=398