MLOC_61564 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_61564






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61564.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_61564.1CUST_8419_PI427708083AvailableNonecontig_45636 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g58710.1 +3 3e-13 67 36/60 (60%) 13104.m06176 protein AMP-binding domain containing protein, expressed
TAIR PP10 AT3G48990.1 +3 9e-11 62 33/56 (59%) AMP-dependent synthetase and ligase family protein | chr3:18159031-18161294 REVERSE LENGTH=514