MLOC_6156 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3043980.06435290.219490.172339
LEAShoots from the seedlings (10 cm shoot stage)0.61927900.519070.490579
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.0531790.025276900.0550602
ROORoots from the seedlings (10 cm shoot stage)0.691770.2709580.5513940.428971
NODDeveloping tillers at six leaf stage, 3rd internode12.165110.57661.3342625.4351
CAR5Developing grain, bracts removed (5 DPA)0.1305520.1230830.1285340.135008
CAR15Developing grain, bracts removed (15 DPA)2.157192.663062.103356.1826



CDS Structure of MLOC_6156






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_6156.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_6156.2CUST_14294_PI427708080AvailableAvailablecontig_137136 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g36460.1 -2 8e-89 280 151/197 (77%) 13101.m03692 protein MYB family transcription factor, putative, expressed
TAIR PP10 AT5G26660.1 -2 7e-65 216 97/121 (80%) | Symbols: ATMYB86, MYB86 | myb domain protein 86 | chr5:9331775-9333044 REVERSE LENGTH=352