- Predicted Gene MLOC_61547
MLOC_61547 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_61547_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_61547_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 1.16947 | 1.02868 | 1.02837 | 1.10492 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.97021 | 0.232062 | 1.24934 | 0.887856 |
INF1 | Young developing inflorescences (5mm) | 0.131405 | 0.0541364 | 0.0822529 | 0.0826224 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.747121 | 0.325111 | 0.752406 | 0.474114 |
NOD | Developing tillers at six leaf stage, 3rd internode | 6.3565 | 10.7743 | 27.8336 | 38.7011 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.409292 | 0.607481 | 0.567597 | 0.612235 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.867865 | 0.87945 | 0.673746 | 2.27065 |
CDS Structure of MLOC_61547
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_61547.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g30100.1 |
+1 |
7e-97 |
301 |
182/291 (63%) |
13108.m03115 protein 1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed |
TAIR PP10 |
AT1G06620.1 |
+1 |
2e-80 |
257 |
158/321 (49%) |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:2025618-2027094 FORWARD LENGTH=365 |