MLOC_61546 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains34.950746.711943.17460
LEAShoots from the seedlings (10 cm shoot stage)40.510326.107730.25570
INF1Young developing inflorescences (5mm)11.437910.617212.3260
INF2Developing inflorescences (1-1.5 cm)7.657559.228098.647680
ROORoots from the seedlings (10 cm shoot stage)51.643147.915552.9060
NODDeveloping tillers at six leaf stage, 3rd internode68.598139.820146.74720
CAR5Developing grain, bracts removed (5 DPA)15.550617.245722.81380
CAR15Developing grain, bracts removed (15 DPA)7.662397.361065.822120



CDS Structure of MLOC_61546






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK252358.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252358.1CUST_19143_PI427708080NoneNoneNone
MLOC_25463.1NoneAvailableNonecontig_1693002 (Mapped)
MLOC_28012.1NoneAvailableNonecontig_188327 (Not mapped)
MLOC_28132.1NoneAvailableNonecontig_189406 (Mapped)
MLOC_35957.1NoneAvailableAvailablecontig_252742 (Mapped)
MLOC_41448.2NoneAvailableNonecontig_2588825 (Mapped)
MLOC_59689.1NoneAvailableNonecontig_438270 (Mapped)
MLOC_61546.2NoneAvailableNonecontig_45617 (Mapped)
MLOC_79125.1NoneAvailableNonecontig_835039 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----