MLOC_61543 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.167048000.2464
LEAShoots from the seedlings (10 cm shoot stage)00.13911700.0870628
INF1Young developing inflorescences (5mm)0.0627015000.0590059
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0.655660.6946382.424212.56778
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_61543






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61543.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_61543.1CUST_8414_PI427708083AvailableAvailablecontig_45614 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g23770.1 +1 3e-34 134 74/221 (33%) 13112.m02415 protein retrotransposon protein, putative, LINE subclass
TAIR PP10None-----