MLOC_6154 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 16.3556 | 13.113 | 11.1638 | 15.9919 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 9.22846 | 9.01019 | 14.9034 | 11.1275 |
| INF1 | Young developing inflorescences (5mm) | 16.6451 | 17.1706 | 16.074 | 16.7434 |
| INF2 | Developing inflorescences (1-1.5 cm) | 15.4212 | 15.2149 | 13.2848 | 19.632 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 9.91983 | 11.2966 | 9.77212 | 16.8923 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.18908 | 1.939 | 5.44928 | 10.1881 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 10.52 | 13.2515 | 11.6728 | 14.9811 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.71089 | 3.28436 | 2.35588 | 8.09635 |
CDS Structure of MLOC_6154
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6154.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g49780.1 |
+2 |
1e-94 |
285 |
157/190 (83%) |
13102.m05652 protein expressed protein |
| TAIR PP10 |
AT5G30495.1 |
+2 |
5e-57 |
187 |
93/165 (56%) |
Fcf2 pre-rRNA processing protein | chr5:11380190-11381391 FORWARD LENGTH=196 |
