MLOC_61533 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains79.199966.778174.763780.6262
LEAShoots from the seedlings (10 cm shoot stage)72.172729.804637.991240.5795
INF1Young developing inflorescences (5mm)30.101336.726935.85234.0278
INF2Developing inflorescences (1-1.5 cm)55.326546.558747.996661.1873
ROORoots from the seedlings (10 cm shoot stage)121.49390.068767.2097119.239
NODDeveloping tillers at six leaf stage, 3rd internode220.45281.477194.042833.508
CAR5Developing grain, bracts removed (5 DPA)98.307193.234997.5877107.575
CAR15Developing grain, bracts removed (15 DPA)54.467954.527856.1025146.875



CDS Structure of MLOC_61533






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61533.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355982NoneNoneNoneNone
MLOC_61533.1CUST_4482_PI427708080AvailableAvailablecontig_45606 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g70190.1 -2 0.0 803 378/392 (96%) 13101.m07619 protein exostosin family domain containing protein, expressed
TAIR PP10 AT1G27440.1 -2 0.0 721 334/386 (87%) | Symbols: GUT2, IRX10, ATGUT1 | Exostosin family protein | chr1:9529265-9531213 REVERSE LENGTH=412