MLOC_61507 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains39.973444.660943.139342.4613
LEAShoots from the seedlings (10 cm shoot stage)36.225830.980734.980827.5284
INF1Young developing inflorescences (5mm)73.780482.493575.728764.0414
INF2Developing inflorescences (1-1.5 cm)83.235781.439977.992787.898
ROORoots from the seedlings (10 cm shoot stage)46.324547.909439.062352.425
NODDeveloping tillers at six leaf stage, 3rd internode24.267337.108446.2201116.286
CAR5Developing grain, bracts removed (5 DPA)52.464254.261953.800451.2057
CAR15Developing grain, bracts removed (15 DPA)15.029813.379711.654131.8055



CDS Structure of MLOC_61507






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61507.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363204NoneNoneNoneNone
MLOC_61507.1CUST_18229_PI427708080AvailableAvailablecontig_45577 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g59590.1 +2 0.0 1096 543/609 (89%) 13103.m06539 protein ATP/GTP/Ca++ binding protein, putative, expressed
TAIR PP10 AT5G27540.2 +2 0.0 836 405/605 (67%) | Symbols: MIRO1 | MIRO-related GTP-ase 1 | chr5:9722816-9727112 FORWARD LENGTH=648