- Predicted Gene MLOC_61499
MLOC_61499 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_61499_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_61499_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.910211 | 0.808525 | 0.776498 | 0.85459 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.456763 | 0.195352 | 0.19671 | 0.255175 |
INF1 | Young developing inflorescences (5mm) | 1.36601 | 1.83181 | 1.68508 | 1.44855 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.14852 | 1.17274 | 0.887568 | 1.24917 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.242908 | 0.463189 | 0.509081 | 0.560099 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0482978 | 0.0461807 | 0.165289 | 0.236781 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.522447 | 0.409681 | 0.801302 | 0.575413 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.387126 | 0.266596 | 0.293396 | 0.787157 |
CDS Structure of MLOC_61499
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_61499.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g38930.1 |
+3 |
0.0 |
611 |
315/439 (72%) |
13104.m03754 protein pentatricopeptide, putative, expressed |
TAIR PP10 |
AT1G09680.1 |
+3 |
2e-126 |
394 |
206/438 (47%) |
Pentatricopeptide repeat (PPR) superfamily protein | chr1:3134107-3135930 REVERSE LENGTH=607 |