MLOC_61496 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)00.216330.8763740.485042
INF1Young developing inflorescences (5mm)00.036031500.0374573
INF2Developing inflorescences (1-1.5 cm)0.19010.030422600.143043
ROORoots from the seedlings (10 cm shoot stage)00.046395300.203473
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)1.643331.160721.264281.33785
CAR15Developing grain, bracts removed (15 DPA)24.178627.055720.129660.6876



CDS Structure of MLOC_61496






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61496.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373810NoneNoneNoneNone
MLOC_61496.1CUST_4473_PI427708080AvailableAvailablecontig_45569 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g11620.1 -2 0.0 590 276/369 (75%) 13101.m01248 protein GDSL-like lipase/acylhydrolase, putative, expressed
TAIR PP10 AT5G45910.1 -2 4e-100 307 155/363 (43%) GDSL-like Lipase/Acylhydrolase superfamily protein | chr5:18620420-18622264 REVERSE LENGTH=372