MLOC_6149 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0.3992450.3939770.9515260
INF1Young developing inflorescences (5mm)0.22377600.2704770
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode00.13093700
CAR5Developing grain, bracts removed (5 DPA)00.19934500
CAR15Developing grain, bracts removed (15 DPA)0.4352650.4498730.9762640



CDS Structure of MLOC_6149






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK370679
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370679CUST_25479_PI427708080NoneNoneNone
MLOC_2959.1NoneAvailableNonecontig_1265693 (Not mapped)
MLOC_29804.1NoneAvailableNonecontig_2038247 (Not mapped)
MLOC_30820.1NoneAvailableNonecontig_2129556 (Not mapped)
MLOC_32789.1NoneAvailableNonecontig_2319743 (Not mapped)
MLOC_34788.1NoneAvailableNonecontig_2445787 (Mapped)
MLOC_35629.1NoneAvailableAvailablecontig_2508664 (Not mapped)
MLOC_41911.1NoneAvailableNonecontig_2613372 (Mapped)
MLOC_47588.1NoneAvailableNonecontig_308571 (Not mapped)
MLOC_6149.1NoneAvailableNonecontig_1371287 (Not mapped)
MLOC_75619.1NoneAvailableNonecontig_683898 (Not mapped)
MLOC_852.1NoneAvailableNonecontig_1068119 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----