- Predicted Gene MLOC_61489
MLOC_61489 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_61489_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_61489_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 4.63462 | 3.59475 | 4.29635 | 4.02248 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 5.24336 | 2.93492 | 4.1996 | 3.1012 |
INF1 | Young developing inflorescences (5mm) | 0.20254 | 0.385363 | 0.677063 | 0.402785 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0498764 | 0 | 0 | 0.0630965 |
ROO | Roots from the seedlings (10 cm shoot stage) | 15.7663 | 5.70397 | 8.70374 | 7.59689 |
NOD | Developing tillers at six leaf stage, 3rd internode | 17.568 | 22.8998 | 15.5552 | 47.6118 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.0305284 | 0.0589211 | 0.0828497 | 0.0631577 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0714388 | 0.0654558 | 0.102544 | 0.214747 |
CDS Structure of MLOC_61489
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_61489.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g16350.1 |
-3 |
4e-97 |
299 |
221/258 (86%) |
13103.m01945 protein DNA binding protein, putative, expressed |
TAIR PP10 |
AT3G04570.1 |
-3 |
2e-38 |
144 |
105/167 (63%) |
| Symbols: AHL19 | AT-hook motif nuclear-localized protein 19 | chr3:1231221-1232168 FORWARD LENGTH=315 |