MLOC_61489 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.634623.594754.296354.02248
LEAShoots from the seedlings (10 cm shoot stage)5.243362.934924.19963.1012
INF1Young developing inflorescences (5mm)0.202540.3853630.6770630.402785
INF2Developing inflorescences (1-1.5 cm)0.0498764000.0630965
ROORoots from the seedlings (10 cm shoot stage)15.76635.703978.703747.59689
NODDeveloping tillers at six leaf stage, 3rd internode17.56822.899815.555247.6118
CAR5Developing grain, bracts removed (5 DPA)0.03052840.05892110.08284970.0631577
CAR15Developing grain, bracts removed (15 DPA)0.07143880.06545580.1025440.214747



CDS Structure of MLOC_61489






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61489.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367679NoneNoneNoneNone
MLOC_61489.1CUST_18228_PI427708080AvailableAvailablecontig_45563 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g16350.1 -3 4e-97 299 221/258 (86%) 13103.m01945 protein DNA binding protein, putative, expressed
TAIR PP10 AT3G04570.1 -3 2e-38 144 105/167 (63%) | Symbols: AHL19 | AT-hook motif nuclear-localized protein 19 | chr3:1231221-1232168 FORWARD LENGTH=315