MLOC_61475 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.2346220.2674190.198445
LEAShoots from the seedlings (10 cm shoot stage)0.2155090.3358550.644960.273988
INF1Young developing inflorescences (5mm)0.1707060.05902320.1452360.085257
INF2Developing inflorescences (1-1.5 cm)0.2283250.2560510.3006620.229073
ROORoots from the seedlings (10 cm shoot stage)0.2294730.06275610.3933430.143254
NODDeveloping tillers at six leaf stage, 3rd internode00.1183630.08722820.460624
CAR5Developing grain, bracts removed (5 DPA)0.1614980.0492450.2454990.123928
CAR15Developing grain, bracts removed (15 DPA)0.643150.06139820.1707550.736724



CDS Structure of MLOC_61475






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61475.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_61475.1CUST_14280_PI427708080AvailableAvailablecontig_45548 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g14270.1 +3 2e-31 129 58/109 (53%) 13111.m01462 protein transposon protein, putative, unclassified
TAIR PP10 AT2G06541.2 +3 2e-14 75 37/103 (36%) TTF-type zinc finger protein with HAT dimerisation domain | chr2:2598222-2600326 REVERSE LENGTH=564