MLOC_61471 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.426112.837161.867331.82595
LEAShoots from the seedlings (10 cm shoot stage)3.003583.408984.017172.4957
INF1Young developing inflorescences (5mm)8.010647.929418.480445.26595
INF2Developing inflorescences (1-1.5 cm)10.37278.955768.013298.39656
ROORoots from the seedlings (10 cm shoot stage)1.333032.214121.769362.03483
NODDeveloping tillers at six leaf stage, 3rd internode1.215651.624973.155135.53774
CAR5Developing grain, bracts removed (5 DPA)3.617793.53943.839682.82732
CAR15Developing grain, bracts removed (15 DPA)1.709281.682821.443872.9265



CDS Structure of MLOC_61471






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61471.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_61471.2CUST_8409_PI427708083AvailableAvailablecontig_45539 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g45890.2 +2 3e-176 518 255/371 (69%) 13105.m04883 protein tRNAHis guanylyltransferase family protein, expressed
TAIR PP10 AT2G31580.1 +2 2e-88 294 154/367 (42%) tRNAHis guanylyltransferase | chr2:13441137-13445837 REVERSE LENGTH=567