MLOC_61466 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains17.579817.668618.626118.0023
LEAShoots from the seedlings (10 cm shoot stage)22.474234.133531.691324.7533
INF1Young developing inflorescences (5mm)5.874346.753986.862975.49401
INF2Developing inflorescences (1-1.5 cm)9.4557612.259710.580911.818
ROORoots from the seedlings (10 cm shoot stage)26.03528.545524.6532.9647
NODDeveloping tillers at six leaf stage, 3rd internode13.841814.056912.670945.4004
CAR5Developing grain, bracts removed (5 DPA)21.218.948615.956518.0605
CAR15Developing grain, bracts removed (15 DPA)1.789542.200842.321964.79525



CDS Structure of MLOC_61466






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61466.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248626.1NoneNoneNoneNone
MLOC_61466.1CUST_4470_PI427708080AvailableAvailablecontig_45530 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g34550.2 -1 0.0 655 360/460 (78%) 13105.m03595 protein MLO domain containing protein, putative, expressed
TAIR PP10 AT4G02600.2 -1 7e-180 528 280/415 (67%) | Symbols: MLO1, ATMLO1 | Seven transmembrane MLO family protein | chr4:1144141-1147156 FORWARD LENGTH=526