MLOC_61456 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.927585.074314.918585.78594
LEAShoots from the seedlings (10 cm shoot stage)3.623926.084495.825765.05287
INF1Young developing inflorescences (5mm)0.1124250.20293100.17109
INF2Developing inflorescences (1-1.5 cm)0.07049320.1304810.1370990.146253
ROORoots from the seedlings (10 cm shoot stage)0.2556360.9480640.3892931.15961
NODDeveloping tillers at six leaf stage, 3rd internode0.03346190.1026270.2062070.459187
CAR5Developing grain, bracts removed (5 DPA)6.784564.01925.338315.78866
CAR15Developing grain, bracts removed (15 DPA)00.08525670.05785760.273314



CDS Structure of MLOC_61456






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61456.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_61456.1CUST_8408_PI427708083AvailableAvailablecontig_45520 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g04920.1 +1 0.0 519 251/280 (90%) 13101.m00457 protein glycosyl transferase, group 1 domain containing protein, expressed
TAIR PP10 AT5G01220.1 +1 2e-141 414 200/280 (71%) | Symbols: SQD2 | sulfoquinovosyldiacylglycerol 2 | chr5:86907-89885 REVERSE LENGTH=510