MLOC_61455 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains96.877868.241767.220874.9781
LEAShoots from the seedlings (10 cm shoot stage)45.534739.804170.368442.5546
INF1Young developing inflorescences (5mm)84.7574100.221105.37783.1452
INF2Developing inflorescences (1-1.5 cm)91.169196.737383.4471102.768
ROORoots from the seedlings (10 cm shoot stage)116.55677.719357.12793.6879
NODDeveloping tillers at six leaf stage, 3rd internode17.541534.632269.6719126.607
CAR5Developing grain, bracts removed (5 DPA)62.765365.344462.479864.1441
CAR15Developing grain, bracts removed (15 DPA)15.785414.4314.330535.7008



CDS Structure of MLOC_61455






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61455.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368114NoneNoneNoneNone
MLOC_61455.1CUST_4466_PI427708080AvailableAvailablecontig_45518 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g45950.1 +1 7e-110 333 193/271 (71%) 13105.m04890 protein outer mitochondrial membrane porin, putative, expressed
TAIR PP10 AT5G15090.2 +1 8e-81 257 154/271 (57%) | Symbols: VDAC3 | voltage dependent anion channel 3 | chr5:4889641-4891389 REVERSE LENGTH=274