MLOC_61454 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains41.611840.511540.121344.8507
LEAShoots from the seedlings (10 cm shoot stage)40.897112.077812.499219.7034
INF1Young developing inflorescences (5mm)64.614963.449967.206158.269
INF2Developing inflorescences (1-1.5 cm)80.947485.712574.668397.0515
ROORoots from the seedlings (10 cm shoot stage)23.735735.349827.779643.925
NODDeveloping tillers at six leaf stage, 3rd internode17.464922.139918.78177.1997
CAR5Developing grain, bracts removed (5 DPA)63.238958.45161.018564.9707
CAR15Developing grain, bracts removed (15 DPA)16.637815.605916.851540.5151



CDS Structure of MLOC_61454






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61454.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362331NoneNoneNoneNone
MLOC_61454.3CUST_4465_PI427708080AvailableAvailablecontig_45518 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g45930.1 +2 0.0 810 449/580 (77%) 13105.m04888 protein IQ calmodulin-binding motif family protein, putative, expressed
TAIR PP10 AT1G74690.1 +2 3e-82 276 240/612 (39%) | Symbols: IQD31 | IQ-domain 31 | chr1:28061498-28063924 REVERSE LENGTH=587