MLOC_61453 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains16.427818.040721.290519.7426
LEAShoots from the seedlings (10 cm shoot stage)48.19612.987615.864921.4874
INF1Young developing inflorescences (5mm)20.296922.371618.58319.0064
INF2Developing inflorescences (1-1.5 cm)24.727325.383424.805729.8901
ROORoots from the seedlings (10 cm shoot stage)26.053820.359120.308425.5113
NODDeveloping tillers at six leaf stage, 3rd internode24.740227.870416.703377.19
CAR5Developing grain, bracts removed (5 DPA)21.23722.436723.091923.8499
CAR15Developing grain, bracts removed (15 DPA)6.389945.638946.4521815.6276



CDS Structure of MLOC_61453






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61453.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248294.1NoneNoneNoneNone
MLOC_61453.2CUST_4464_PI427708080AvailableAvailablecontig_45510 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g58910.1 -1 0.0 1168 647/895 (72%) 13104.m06207 protein receptor protein kinase TMK1 precursor, putative, expressed
TAIR PP10 AT2G01820.1 -1 0.0 713 421/906 (46%) Leucine-rich repeat protein kinase family protein | chr2:357664-360681 REVERSE LENGTH=943