- Predicted Gene MLOC_61417
MLOC_61417 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 29.2519 | 38.3301 | 36.7892 | 36.5847 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 33.6342 | 24.8513 | 25.8642 | 24.4795 |
| INF1 | Young developing inflorescences (5mm) | 60.8995 | 59.9209 | 52.5729 | 49.0788 |
| INF2 | Developing inflorescences (1-1.5 cm) | 56.5408 | 58.6401 | 55.4871 | 62.8207 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 25.1579 | 41.7891 | 33.1012 | 47.3911 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 13.5878 | 16.7128 | 24.3998 | 58.8388 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 46.6402 | 49.0159 | 47.6356 | 46.9144 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 27.8309 | 24.4989 | 23.6451 | 58.5623 |
CDS Structure of MLOC_61417
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_61417.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g19960.1 |
-2 |
0.0 |
1347 |
690/722 (96%) |
13103.m02393 protein ATP-dependent RNA helicase, putative, expressed |
| TAIR PP10 |
AT2G47250.1 |
-2 |
0.0 |
1245 |
634/727 (87%) |
RNA helicase family protein | chr2:19399923-19402981 REVERSE LENGTH=729 |