MLOC_61417 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains29.251938.330136.789236.5847
LEAShoots from the seedlings (10 cm shoot stage)33.634224.851325.864224.4795
INF1Young developing inflorescences (5mm)60.899559.920952.572949.0788
INF2Developing inflorescences (1-1.5 cm)56.540858.640155.487162.8207
ROORoots from the seedlings (10 cm shoot stage)25.157941.789133.101247.3911
NODDeveloping tillers at six leaf stage, 3rd internode13.587816.712824.399858.8388
CAR5Developing grain, bracts removed (5 DPA)46.640249.015947.635646.9144
CAR15Developing grain, bracts removed (15 DPA)27.830924.498923.645158.5623



CDS Structure of MLOC_61417






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61417.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249534.1NoneNoneNoneNone
MLOC_61417.2CUST_4458_PI427708080AvailableAvailablecontig_45474 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g19960.1 -2 0.0 1347 690/722 (96%) 13103.m02393 protein ATP-dependent RNA helicase, putative, expressed
TAIR PP10 AT2G47250.1 -2 0.0 1245 634/727 (87%) RNA helicase family protein | chr2:19399923-19402981 REVERSE LENGTH=729