- Predicted Gene MLOC_61395
MLOC_61395 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_61395_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_61395_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 4.73958 | 9.144 | 9.12229 | 8.48608 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 10.7097 | 8.06329 | 5.06317 | 7.31253 |
INF1 | Young developing inflorescences (5mm) | 13.5204 | 13.7859 | 14.3911 | 11.5927 |
INF2 | Developing inflorescences (1-1.5 cm) | 22.1263 | 18.0895 | 18.4394 | 21.7926 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.03535 | 7.36066 | 6.97973 | 8.91395 |
NOD | Developing tillers at six leaf stage, 3rd internode | 10.0942 | 10.1321 | 14.4211 | 39.9795 |
CAR5 | Developing grain, bracts removed (5 DPA) | 10.9789 | 12.7501 | 12.7954 | 12.4612 |
CAR15 | Developing grain, bracts removed (15 DPA) | 7.36811 | 7.09022 | 7.35408 | 16.587 |
CDS Structure of MLOC_61395
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_61395.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g51230.2 |
-1 |
0.0 |
723 |
416/562 (74%) |
13103.m05570 protein SNF2 family N-terminal domain containing protein, expressed |
TAIR PP10 |
AT5G66750.1 |
-1 |
0.0 |
556 |
315/500 (63%) |
| Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDDM1 | chromatin remodeling 1 | chr5:26649050-26652869 FORWARD LENGTH=764 |