MLOC_61395 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.739589.1449.122298.48608
LEAShoots from the seedlings (10 cm shoot stage)10.70978.063295.063177.31253
INF1Young developing inflorescences (5mm)13.520413.785914.391111.5927
INF2Developing inflorescences (1-1.5 cm)22.126318.089518.439421.7926
ROORoots from the seedlings (10 cm shoot stage)3.035357.360666.979738.91395
NODDeveloping tillers at six leaf stage, 3rd internode10.094210.132114.421139.9795
CAR5Developing grain, bracts removed (5 DPA)10.978912.750112.795412.4612
CAR15Developing grain, bracts removed (15 DPA)7.368117.090227.3540816.587



CDS Structure of MLOC_61395






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61395.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_61395.3CUST_14267_PI427708080AvailableAvailablecontig_45453 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g51230.2 -1 0.0 723 416/562 (74%) 13103.m05570 protein SNF2 family N-terminal domain containing protein, expressed
TAIR PP10 AT5G66750.1 -1 0.0 556 315/500 (63%) | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDDM1 | chromatin remodeling 1 | chr5:26649050-26652869 FORWARD LENGTH=764