- Predicted Gene MLOC_61394
MLOC_61394 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_61394_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_61394_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 5.93639 | 5.7532 | 5.51612 | 6.33664 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.4912 | 7.54722 | 5.90796 | 6.59082 |
INF1 | Young developing inflorescences (5mm) | 9.86416 | 9.31403 | 12.0551 | 9.36158 |
INF2 | Developing inflorescences (1-1.5 cm) | 15.3653 | 14.0793 | 15.1451 | 17.2147 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.87402 | 6.82542 | 3.30035 | 8.07369 |
NOD | Developing tillers at six leaf stage, 3rd internode | 7.98915 | 12.3544 | 18.6374 | 48.9999 |
CAR5 | Developing grain, bracts removed (5 DPA) | 9.2456 | 10.4352 | 12.0079 | 10.8353 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.62617 | 6.10093 | 5.56067 | 14.0137 |
CDS Structure of MLOC_61394
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_61394.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os09g27060.1 |
-2 |
4e-112 |
345 |
196/219 (89%) |
13109.m02626 protein SNF2 family N-terminal domain containing protein, expressed |
TAIR PP10 |
AT5G66750.1 |
-2 |
2e-82 |
265 |
147/221 (67%) |
| Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDDM1 | chromatin remodeling 1 | chr5:26649050-26652869 FORWARD LENGTH=764 |