MLOC_61392 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.7050920.727040.5173430.713423
LEAShoots from the seedlings (10 cm shoot stage)5.5071218.488917.81612.1498
INF1Young developing inflorescences (5mm)0.09956840.08749910.1222350.0992104
INF2Developing inflorescences (1-1.5 cm)0.143040.1080510.09861440.145866
ROORoots from the seedlings (10 cm shoot stage)0.8928060.5181861.584420.850583
NODDeveloping tillers at six leaf stage, 3rd internode0.1005750.2352861.224721.33774
CAR5Developing grain, bracts removed (5 DPA)0.6693830.6336760.5903340.700559
CAR15Developing grain, bracts removed (15 DPA)0.38910.4321310.2823091.06524



CDS Structure of MLOC_61392






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61392.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374817NoneNoneNoneNone
MLOC_61392.1CUST_4456_PI427708080AvailableAvailablecontig_45453 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g45210.1 +1 2e-115 342 178/227 (78%) 13104.m04532 protein peroxisomal biogenesis factor 11, putative, expressed
TAIR PP10 AT3G47430.1 +1 3e-89 275 142/231 (61%) | Symbols: PEX11B | peroxin 11B | chr3:17480798-17481692 FORWARD LENGTH=227