MLOC_61356 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.013581.3181.611971.28245
LEAShoots from the seedlings (10 cm shoot stage)0.7270190.07454480.1304890.267632
INF1Young developing inflorescences (5mm)4.633224.192774.487363.62247
INF2Developing inflorescences (1-1.5 cm)3.155774.519963.371124.13017
ROORoots from the seedlings (10 cm shoot stage)0.5026330.9186170.6366330.998593
NODDeveloping tillers at six leaf stage, 3rd internode0.02555880.032787800.082745
CAR5Developing grain, bracts removed (5 DPA)2.408922.054013.151022.43996
CAR15Developing grain, bracts removed (15 DPA)0.1511720.1955560.1927550.366193



CDS Structure of MLOC_61356






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61356.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_61356.2CUST_14263_PI427708080AvailableAvailablecontig_45414 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g01130.1 -3 0.0 714 439/734 (60%) 13108.m00017 protein flap endonuclease, putative, expressed
TAIR PP10 AT3G48900.2 -3 1e-149 456 229/426 (54%) single-stranded DNA endonuclease family protein | chr3:18131854-18136239 FORWARD LENGTH=600