MLOC_6135 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 24.4364 | 16.0834 | 18.3868 | 17.6756 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 257.979 | 381.291 | 772.192 | 343.463 |
| INF1 | Young developing inflorescences (5mm) | 10.9724 | 12.3419 | 13.6462 | 10.1587 |
| INF2 | Developing inflorescences (1-1.5 cm) | 6.76686 | 7.48235 | 7.23117 | 7.47343 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.58227 | 2.43118 | 8.22441 | 3.30131 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 168.867 | 241.921 | 357.393 | 660.414 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 52.3399 | 64.8838 | 61.6934 | 55.5035 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 6.20294 | 8.12148 | 6.25048 | 16.2402 |
CDS Structure of MLOC_6135
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6135.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g01380.1 |
-2 |
2e-36 |
134 |
90/102 (88%) |
13108.m00056 protein 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed |
| TAIR PP10 |
AT1G60950.1 |
-2 |
4e-27 |
107 |
76/103 (74%) |
| Symbols: FED A, ATFD2 | 2Fe-2S ferredoxin-like superfamily protein | chr1:22444565-22445011 FORWARD LENGTH=148 |
