- Predicted Gene MLOC_61346
MLOC_61346 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_61346_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_61346_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 6.17153 | 21.1498 | 16.555 | 16.2702 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 21.4623 | 16.1502 | 14.3223 | 15.2155 |
INF1 | Young developing inflorescences (5mm) | 45.1126 | 47.5601 | 40.9513 | 36.7008 |
INF2 | Developing inflorescences (1-1.5 cm) | 52.6051 | 54.1759 | 46.9716 | 56.6094 |
ROO | Roots from the seedlings (10 cm shoot stage) | 6.9066 | 14.2747 | 10.3349 | 15.9087 |
NOD | Developing tillers at six leaf stage, 3rd internode | 7.34155 | 11.2751 | 14.1267 | 39.5793 |
CAR5 | Developing grain, bracts removed (5 DPA) | 40.7992 | 38.2661 | 38.7116 | 38.3055 |
CAR15 | Developing grain, bracts removed (15 DPA) | 44.8198 | 38.3619 | 40.4473 | 91.4126 |
CDS Structure of MLOC_61346
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_61346.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g08480.1 |
-1 |
0.0 |
1070 |
571/656 (87%) |
13106.m00885 protein CHD3-type chromatin-remodeling factor PICKLE, putative, expressed |
TAIR PP10 |
AT2G25170.1 |
-1 |
0.0 |
942 |
490/757 (65%) |
| Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin remodeling factor CHD3 (PICKLE) | chr2:10714411-10723763 FORWARD LENGTH=1384 |