MLOC_61345 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.7864817.650716.379910.8372
LEAShoots from the seedlings (10 cm shoot stage)19.333314.962416.26511.9517
INF1Young developing inflorescences (5mm)41.925540.311733.282725.7277
INF2Developing inflorescences (1-1.5 cm)47.609646.734237.640740.0054
ROORoots from the seedlings (10 cm shoot stage)6.2591415.65789.315512.132
NODDeveloping tillers at six leaf stage, 3rd internode8.0040611.915916.284132.7076
CAR5Developing grain, bracts removed (5 DPA)31.532431.583928.761922.5875
CAR15Developing grain, bracts removed (15 DPA)29.683527.100926.184351.1577



CDS Structure of MLOC_61345






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61345.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_61345.1CUST_12885_PI427708083AvailableAvailablecontig_45402 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g08480.1 -1 4e-12 66 56/67 (84%) 13106.m00885 protein CHD3-type chromatin-remodeling factor PICKLE, putative, expressed
TAIR PP10None-----