MLOC_61338 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains15.322112.394516.008314.7796
LEAShoots from the seedlings (10 cm shoot stage)1.958795.275610.06465.37535
INF1Young developing inflorescences (5mm)11.372510.553115.273111.2431
INF2Developing inflorescences (1-1.5 cm)9.3584213.682618.420416.3482
ROORoots from the seedlings (10 cm shoot stage)9.445155.586196.232987.62107
NODDeveloping tillers at six leaf stage, 3rd internode1.866161.04420.5475923.12598
CAR5Developing grain, bracts removed (5 DPA)10.704811.674613.889813.2061
CAR15Developing grain, bracts removed (15 DPA)2.087652.352464.511387.15433



CDS Structure of MLOC_61338






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61338.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376555NoneNoneNoneNone
MLOC_61338.4CUST_18227_PI427708080AvailableAvailablecontig_45349 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g31030.1 -3 0.0 590 307/388 (79%) 13102.m03392 protein glycerophosphoryl diester phosphodiesterase family protein, putative, expressed
TAIR PP10 AT5G41080.1 -3 1e-136 408 213/382 (56%) PLC-like phosphodiesterases superfamily protein | chr5:16441858-16443835 FORWARD LENGTH=374