MLOC_61314 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.921615.603415.579614.5949
LEAShoots from the seedlings (10 cm shoot stage)12.732810.056810.36448.76688
INF1Young developing inflorescences (5mm)15.899116.903517.103513.3743
INF2Developing inflorescences (1-1.5 cm)16.181616.383913.924516.3991
ROORoots from the seedlings (10 cm shoot stage)7.902412.03459.7336212.2621
NODDeveloping tillers at six leaf stage, 3rd internode12.165910.682510.454931.1478
CAR5Developing grain, bracts removed (5 DPA)21.677222.544824.096320.8577
CAR15Developing grain, bracts removed (15 DPA)2.416523.042253.08726.22596



CDS Structure of MLOC_61314






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61314.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372977NoneNoneNoneNone
MLOC_61314.1CUST_4443_PI427708080AvailableAvailablecontig_45372 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g02820.1 +3 0.0 691 374/420 (89%) 13112.m00229 protein cytidylyltransferase domain containing protein, expressed
TAIR PP10 AT2G38670.1 +3 0.0 601 295/365 (81%) | Symbols: PECT1 | phosphorylethanolamine cytidylyltransferase 1 | chr2:16168979-16171680 FORWARD LENGTH=421